Here is a patch for recent download file location and FreeBSD kernel.


-- download/mmg3d/ORGMakefile	2012-06-05 11:32:59.000000000 +0900
+++ download/mmg3d/Makefile	2012-06-10 16:40:40.000000000 +0900
@@ -50,7 +50,7 @@
 
 $(PACKAGE):
 	-mkdir $(DIRPKG);
-	cd $(DIRPKG);$(WGET) http://www.math.u-bordeaux1.fr/~dobj/logiciels/download/mmg3d4.0.tgz 
+	cd $(DIRPKG);$(WGET) http://www.math.u-bordeaux1.fr/~cdobrzyn/logiciels/download/mmg3d4.0.tgz 
 #http://www.math.u-bordeaux1.fr/~dobj/logiciels/download.php?file=`basename $(PACKAGE)`
 
 
@@ -97,4 +97,4 @@
 	grep 'WGET *=' ../Makefile >> ff-flags
 	grep 'STD_LIBS *=' ../Makefile >> ff-flags
 	grep 'CNOFLAGS *=' ../Makefile >> ff-flags
-.PHONY:$(SRCDIR)/$(INSTALL)
\ No newline at end of file
+.PHONY:$(SRCDIR)/$(INSTALL)


--- download/mshmet/ORGmshmet.2011.03.06.patch	2012-06-05 11:32:59.000000000 +0900
+++ download/mshmet/mshmet.2011.03.06.patch	2012-06-07 15:54:50.000000000 +0900
@@ -39,3 +39,25 @@
 +extern int   (*lissag)(pMesh ,pSol , int ,int );
  
  #endif
+--- mshmet.2011.03.06/sources/lplib3.c 2012-06-06 09:32:14.000000000 +0000
++++ mshmet.2011.03.06/sourceslib/lplib3.c 2012-06-06 09:35:19.000000000 +0000
+@@ -30,6 +30,10 @@
+ #include <assert.h>
+ #include <errno.h>
+ #include "lplib3.h"
++#ifdef __FreeBSD__
++#include <sys/types.h>
++#include <pmc.h>
++#endif
+ 
+ 
+ /*----------------------------------------------------------*/
+@@ -1250,6 +1254,8 @@
+ 		 * NPROC environment variable (BSD/OS, CrayOS)
+ 		 * sysctl hw.ncpu or kern.smp.cpus
+ 		 */
++		int ncpu;
++
+ 		if (pmc_init() == 0 && (ncpu = pmc_ncpu()) != -1)
+ 			maxthreads = ncpu;
+ 		else
--- download/hips/ORGhips-1.2b-rc4.patch	2012-06-05 11:32:59.000000000 +0900
+++ download/hips/hips-1.2b-rc4.patch	2012-06-12 15:17:54.000000000 +0900
@@ -145,3 +145,66 @@
 Only in hips-1.2b-rc4-okk/TESTS/PARALLEL: makefile.orig
 Only in hips-1.2b-rc4-okk: makefile.inc
 Only in hips-1.2b-rc4-okk: tag-ff++
+--- hips-1.2b-rc4/SRC/INCLUDE/ORGlocaldefs.h	2009-06-22 06:12:56.000000000 +0900
++++ hips-1.2b-rc4/SRC/INCLUDE/localdefs.h	2012-06-12 14:22:17.000000000 +0900
+@@ -39,6 +39,9 @@
+ /* knowledge of the CeCILL-C license and that you accept its terms.           */
+ /******************************************************************************/
+ 
++#ifdef __FreeBSD__
++#include <sys/types.h>
++#endif
+ 
+ #if defined(IBM) || defined(SP2) || defined(RS6000)
+ #define wreadmtc wreadmtc
+--- hips-1.2b-rc4/SRC/IO/ORGio_mm.c	2012-06-12 14:13:36.000000000 +0900
++++ hips-1.2b-rc4/SRC/IO/io_mm.c	2012-06-12 14:27:39.000000000 +0900
+@@ -14,8 +14,10 @@
+ #ifdef __APPLE__
+ #include <malloc/malloc.h>
+ #else
++#ifndef __FreeBSD__
+ #include <malloc.h>
+ #endif
++#endif
+ #include <ctype.h>
+ 
+ 
+--- download/hips-1.2b-rc4/SRC/IO/ORGio_hb.h	2012-06-12 14:13:36.000000000 +0900
++++ download/hips-1.2b-rc4/SRC/IO/io_hb.h	2012-06-12 14:25:33.000000000 +0900
+@@ -8,8 +8,10 @@
+ #ifdef __APPLE__
+ #include<malloc/malloc.h>
+ #else
++#ifndef __FreeBSD__
+ #include<malloc.h>
+ #endif
++#endif
+ #ifdef __cplusplus
+ extern "C" {
+ #endif
+--- hips-1.2b-rc4/SRC/PHIDAL/COMMON/ORGCSCrowICCprod.c	2009-06-22 06:12:43.000000000 +0900
++++ hips-1.2b-rc4/SRC/PHIDAL/COMMON/CSCrowICCprod.c	2012-06-12 14:15:31.000000000 +0900
+@@ -44,6 +44,9 @@
+ #include <string.h>
+ #include <math.h>
+ #include <stdio.h>
++#ifdef __FreeBSD__
++#include <sys/types.h>
++#endif
+ 
+ #include "phidal_common.h"
+ 
+--- download/hips-1.2b-rc4/SRC/IO/ORGio_hb.c	2012-06-12 15:14:31.000000000 +0900
++++ download/hips-1.2b-rc4/SRC/IO/io_hb.c	2012-06-12 15:16:03.000000000 +0900
+@@ -225,8 +225,10 @@
+ #ifdef __APPLE__
+ #include <malloc/malloc.h>
+ #else
++#ifndef __FreeBSD__
+ #include<malloc.h>
+ #endif
++#endif
+ #include <assert.h>
+ 
+ /** macros FSCANF and FGETS **/
--- download/pastix/ORGMakefile	2012-06-12 14:00:07.000000000 +0900
+++ download/pastix/Makefile	2012-06-12 15:40:00.000000000 +0900
@@ -121,6 +121,7 @@
 	tar xvfj $(PACKAGE1)
 	#cd $(SRCDIR)/src/; patch -p1 < ../../pastix_release_2200-gen.patch
 	cd $(SRCDIR)/src/blend/src/; patch -p2 < ../../../../pastix_release_2200-blend.patch
+	cd $(SRCDIR)/src/common/src/; patch common_pastix.h < ../../../../patch-common_pastix.h
 	touch $(SRCDIR)
 
 $(PACKAGE1):
--- /dev/null	2012-06-12 15:48:04.000000000 +0900
+++ download/pastix/patch-common_pastix.h	2012-06-12 15:44:08.000000000 +0900
@@ -0,0 +1,12 @@
+--- download/ORGcommon_pastix.h	2009-04-17 21:52:36.000000000 +0900
++++ download/common_pastix.h	2012-06-12 14:09:13.000000000 +0900
+@@ -150,7 +150,9 @@
+ #ifdef X_ARCHi686_mac
+ #include            <malloc/malloc.h>
+ #else /* X_ARCHi686_mac */
++#ifndef __FreeBSD__
+ #include            <malloc.h>
++#endif
+ #endif /* X_ARCHi686_mac */
+ #include            <memory.h>
+ #include            <stdio.h>